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/programmatic-eda

@2e18ac4

Systematic exploratory data analysis. Activate when a dataset needs profiling — structure check, nulls, outliers, distributions, correlations — before deeper analysis begins.

Use this Skill: https://skilld.dev/gh/nimrodfisher/data-analytics-skills/programmatic-eda

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referencesquality_thresholds.md

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Quality Thresholds Reference

Default thresholds used by null_profiler.py and the EDA checklist. Override per-project by passing --warn-pct / --fail-pct flags.

Null / Missing Values

Threshold Default Meaning
WARN 5% Column has more nulls than typical — investigate cause
FAIL 30% Column is too sparse for reliable analysis without imputation

Column-type exceptions:

  • Optional demographic fields (e.g. middle_name, secondary_email): set WARN to 50%
  • Pipeline-populated enrichment fields (e.g. geo_region): set WARN to 15%, FAIL to 60%
  • Behavioural event properties that only apply to a subset: document expected null rate

Duplicates

Threshold Default
Full-row duplicate rate > 0% → investigate; > 1% → FAIL
Key-level duplicate rate > 0% → investigate; must justify intentional versioning

Outliers (Numeric Columns)

Method Threshold
IQR Values beyond Q1 − 1.5×IQR or Q3 + 1.5×IQR
Z-score

Outliers are flagged for review, not automatically removed. Each must be classified:

  • Real signal — genuine extreme value (e.g. a high-value enterprise deal)
  • Data error — pipeline bug, unit mismatch, or test data leak
  • Structural — a domain-specific sentinel value (e.g. -1 meaning "unknown")

Value Ranges (Business-logic thresholds)

Column type Rule
Age 0 ≤ age ≤ 120
Revenue / price ≥ 0 (unless refunds are expected; document negative-revenue semantics)
Percentage / rate 0 ≤ x ≤ 1 (or 0–100 — confirm encoding)
Probability score 0 ≤ x ≤ 1
Timestamps Within [system launch date, now + 1 day]

Skewness

| |skew| range | Classification | Recommendation | |---|---|---| | < 0.5 | Approximately normal | No action needed | | 0.5 – 1.0 | Moderate skew | Note; consider log transform before modeling | | > 1.0 | High skew | Investigate; log/sqrt transform likely needed | | > 2.0 | Extreme skew | Investigate for outliers or data errors first |

Correlation Flags

| |r| range | Action | |---|---| | ≥ 0.8 | Flag as strong pair — check for multicollinearity before including both in a model | | ≥ 0.95 | Near-perfect — likely the same underlying measure; consider dropping one |

Source: SKILL.md on GitHub

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    The skill provides a set of Python scripts and markdown templates for performing systematic exploratory data analysis (EDA) on local datasets. It performs data profiling, statistical analysis, and report generation locally without any detected malicious patterns or dangerous network operations.

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Last checked against GitHub 6 days ago.

Activeupdated 5 months ago

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